CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr17.1255 rna-evm.model.Chr17.1255 Chr17 35602341 35603195 PREDICTED: Probable G-protein coupled receptor B0563.6 GO:0004930;GO:0007186;GO:0016020 K08428
gene-evm.TU.Chr17.1256 rna-evm.model.Chr17.1256 Chr17 35645205 35653300 PREDICTED: semaphorin 6 nan K18927
gene-evm.TU.Chr17.126 rna-evm.model.Chr17.126 Chr17 3984311 3985486 PREDICTED: GST-N-Metaxin-like protein nan nan
gene-evm.TU.Chr17.1260 rna-evm.model.Chr17.1260.2 Chr17 35772537 35790096 PREDICTED: Sal-like protein 1 GO:0003676 K24385
gene-evm.TU.Chr17.1261 rna-evm.model.Chr17.1261 Chr17 35797474 35798463 PREDICTED: coatomer subunit beta' nan K14318
gene-evm.TU.Chr17.1262 rna-evm.model.Chr17.1262 Chr17 35807847 35809821 PREDICTED: importin-4 nan nan
gene-evm.TU.Chr17.1263 rna-evm.model.Chr17.1263 Chr17 35813789 35820909 PREDICTED: cap1 methyltransferase [EC:2.1.1.57] nan K06301
gene-evm.TU.Chr17.1264 rna-evm.model.Chr17.1264.1 Chr17 35816798 35835946 PREDICTED: Sal-like protein 1 GO:0003676 K19871
gene-evm.TU.Chr17.1265 rna-evm.model.Chr17.1265 Chr17 35903786 35904742 PREDICTED: Caprin-2 nan K23284
gene-evm.TU.Chr17.1266 rna-evm.model.Chr17.1266 Chr17 35911667 35912483 PREDICTED: protein unc-13 A/B/C nan K13582

For more detailed data, you can explore the Download section to access the full dataset.