CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr17.1245 rna-evm.model.Chr17.1245 Chr17 35254862 35275404 PREDICTED: KICSTOR complex protein C12orf66 homolog nan K23297
gene-evm.TU.Chr17.1246 rna-evm.model.Chr17.1246 Chr17 35281500 35370475 PREDICTED: Exostosin-1b GO:0005783;GO:0006486;GO:0015012;GO:0015020;GO:0016020;GO:0016757 K02366
gene-evm.TU.Chr17.1247 rna-evm.model.Chr17.1247 Chr17 35382315 35408015 PREDICTED: Tubulin epsilon chain GO:0003924;GO:0005874;GO:0007017 K10391
gene-evm.TU.Chr17.1248 rna-evm.model.Chr17.1248 Chr17 35442788 35452449 uncharacterized protein nan K23893
gene-evm.TU.Chr17.1249 rna-evm.model.Chr17.1249 Chr17 35454125 35465813 PREDICTED: Peflin GO:0005509 K23905
gene-evm.TU.Chr17.125 rna-evm.model.Chr17.125 Chr17 3982604 3984300 uncharacterized protein nan nan
gene-evm.TU.Chr17.1250 rna-evm.model.Chr17.1250 Chr17 35479902 35490621 PREDICTED: Zinc finger protein 37 GO:0003676 K09228
gene-evm.TU.Chr17.1252 rna-evm.model.Chr17.1252 Chr17 35511942 35513326 uncharacterized protein nan nan
gene-evm.TU.Chr17.1253 rna-evm.model.Chr17.1253 Chr17 35523586 35531113 PREDICTED: interferon alpha-inducible protein 27-like protein 2B GO:0016020 K26409
gene-evm.TU.Chr17.1254 rna-evm.model.Chr17.1254 Chr17 35534040 35545547 PREDICTED: V-type proton ATPase subunit H GO:0000221;GO:1902600;GO:0046961 K02144

For more detailed data, you can explore the Download section to access the full dataset.