CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr16.756 rna-evm.model.Chr16.756 Chr16 24011226 24012853 PREDICTED: Protein lev-9 nan K17305
gene-evm.TU.Chr16.757 rna-evm.model.Chr16.757 Chr16 24040415 24041384 uncharacterized protein nan K06248
gene-evm.TU.Chr16.759 rna-evm.model.Chr16.759 Chr16 24047883 24057544 PREDICTED: TBC1 domain family member 15 nan K12804
gene-evm.TU.Chr16.76 rna-evm.model.Chr16.76 Chr16 1843933 1848193 PREDICTED: Serine protease inhibitor Cvsi-2 nan nan
gene-evm.TU.Chr16.761 rna-evm.model.Chr16.761 Chr16 24059009 24069163 PREDICTED: Proline-serine-threonine phosphatase-interacting protein 1 nan K12804
gene-evm.TU.Chr16.762 rna-evm.model.Chr16.762 Chr16 24075887 24078187 PREDICTED: Protein MB21D2 nan K17834
gene-evm.TU.Chr16.763 rna-evm.model.Chr16.763 Chr16 24081925 24093848 uncharacterized protein nan K02195
gene-evm.TU.Chr16.764 rna-evm.model.Chr16.764 Chr16 24094468 24115678 PREDICTED: Uncharacterized protein C56G2.4 nan K06910
gene-evm.TU.Chr16.765 rna-evm.model.Chr16.765 Chr16 24168408 24189984 PREDICTED: Beta-2-glycoprotein 1 nan K17305
gene-evm.TU.Chr16.766 rna-evm.model.Chr16.766 Chr16 24184616 24221313 PREDICTED: Proline-serine-threonine phosphatase-interacting protein 1 nan K12804

For more detailed data, you can explore the Download section to access the full dataset.