CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr16.672 rna-evm.model.Chr16.672 Chr16 21250705 21253683 uncharacterized protein nan nan
gene-evm.TU.Chr16.673 rna-evm.model.Chr16.673 Chr16 21255253 21256317 PREDICTED: Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase GO:0006486;GO:0008378;GO:0016020 K07819
gene-evm.TU.Chr16.674 rna-evm.model.Chr16.674 Chr16 21264187 21266673 PREDICTED: sentrin-specific protease 1 [EC:3.4.22.68] nan K14307
gene-evm.TU.Chr16.675 rna-evm.model.Chr16.675 Chr16 21276530 21331304 PREDICTED: Polypeptide N-acetylgalactosaminyltransferase 5 nan K00710
gene-evm.TU.Chr16.676 rna-evm.model.Chr16.676 Chr16 21338667 21345007 PREDICTED: Guanylate-binding protein 1 GO:0003924;GO:0005525 K20899
gene-evm.TU.Chr16.677 rna-evm.model.Chr16.677 Chr16 21370013 21376468 PREDICTED: Guanylate-binding protein 1 GO:0003924;GO:0005525 K20899
gene-evm.TU.Chr16.678 rna-evm.model.Chr16.678 Chr16 21392213 21404014 uncharacterized protein nan K20897
gene-evm.TU.Chr16.682 rna-evm.model.Chr16.682 Chr16 21451551 21481563 PREDICTED: Guanylate-binding protein 2 GO:0003924;GO:0005525 K20899
gene-evm.TU.Chr16.684 rna-evm.model.Chr16.684 Chr16 21543727 21544795 uncharacterized protein nan K24190
gene-evm.TU.Chr16.685 rna-evm.model.Chr16.685 Chr16 21551685 21563357 PREDICTED: Guanylate-binding protein 1 GO:0003924;GO:0005525 K20899

For more detailed data, you can explore the Download section to access the full dataset.