CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr16.625 rna-evm.model.Chr16.625 Chr16 19351609 19369329 PREDICTED: Alkali-sensitive linkage protein 1 nan K21000
gene-evm.TU.Chr16.626 rna-evm.model.Chr16.626 Chr16 19374952 19380312 PREDICTED: Alkali-sensitive linkage protein 1 nan nan
gene-evm.TU.Chr16.628 rna-evm.model.Chr16.628 Chr16 19477733 19480756 PREDICTED: Alkali-sensitive linkage protein 1 nan K22023
gene-evm.TU.Chr16.629 rna-evm.model.Chr16.629 Chr16 19493378 19498710 PREDICTED: Alkali-sensitive linkage protein 1 nan K21000
gene-evm.TU.Chr16.63 rna-evm.model.Chr16.63 Chr16 1595663 1611540 PREDICTED: Ankyrin repeat domain-containing protein 27 nan K20175
gene-evm.TU.Chr16.630 rna-evm.model.Chr16.630 Chr16 19511059 19513295 PREDICTED: Alkali-sensitive linkage protein 1 nan K03821
gene-evm.TU.Chr16.631 rna-evm.model.Chr16.631 Chr16 19565113 19577166 PREDICTED: Alkali-sensitive linkage protein 1 nan K22018
gene-evm.TU.Chr16.633 rna-evm.model.Chr16.633 Chr16 19615181 19618850 PREDICTED: PAXIP1-associated glutamate-rich protein 1A nan K14973
gene-evm.TU.Chr16.634 rna-evm.model.Chr16.634 Chr16 19627420 19634331 PREDICTED: serine protease inhibitor Cvsi-2 nan K16362
gene-evm.TU.Chr16.636 rna-evm.model.Chr16.636 Chr16 19716829 19717267 uncharacterized protein nan K11686

For more detailed data, you can explore the Download section to access the full dataset.