CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr16.650 rna-evm.model.Chr16.650 Chr16 20501615 20503220 PREDICTED: Proton-coupled folate transporter GO:0016020;GO:0055085 K20840
gene-evm.TU.Chr16.652 rna-evm.model.Chr16.652 Chr16 20721970 20726875 uncharacterized protein nan K15172
gene-evm.TU.Chr16.653 rna-evm.model.Chr16.653 Chr16 20728543 20729909 uncharacterized protein nan nan
gene-evm.TU.Chr16.654 rna-evm.model.Chr16.654 Chr16 20734942 20741829 uncharacterized protein nan nan
gene-evm.TU.Chr16.655 rna-evm.model.Chr16.655 Chr16 20825508 20826136 PREDICTED: Protein GVQW3 nan nan
gene-evm.TU.Chr16.656 rna-evm.model.Chr16.656 Chr16 20848747 20886412 PREDICTED: Heat shock 70 kDa protein 12A nan K04043
gene-evm.TU.Chr16.657 rna-evm.model.Chr16.657 Chr16 20893793 20895706 PREDICTED: Selenoprotein H nan K07401
gene-evm.TU.Chr16.658 rna-evm.model.Chr16.658 Chr16 20896563 20910149 PREDICTED: Ketohexokinase nan K00846
gene-evm.TU.Chr16.659 rna-evm.model.Chr16.659 Chr16 20915230 20917799 PREDICTED: Tubulin alpha-2/alpha-4 chain GO:0003924;GO:0005200;GO:0005525;GO:0005874;GO:0007017 K07374
gene-evm.TU.Chr16.66 rna-evm.model.Chr16.66 Chr16 1721118 1723137 PREDICTED: Interleukin 17-like protein GO:0005125;GO:0005576 K05494

For more detailed data, you can explore the Download section to access the full dataset.