CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr16.468 rna-evm.model.Chr16.468 Chr16 14270906 14271748 uncharacterized protein GO:0000166;GO:0003677;GO:0003887;GO:0006260 nan
gene-evm.TU.Chr16.469 rna-evm.model.Chr16.469 Chr16 14271997 14273415 uncharacterized protein nan nan
gene-evm.TU.Chr16.47 rna-evm.model.Chr16.47 Chr16 1303930 1334100 PREDICTED: Coiled-coil domain-containing protein 62 nan K26436
gene-evm.TU.Chr16.471 rna-evm.model.Chr16.471 Chr16 14310343 14315781 PREDICTED: Prolyl 4-hydroxylase subunit alpha-1 nan K00472
gene-evm.TU.Chr16.472 rna-evm.model.Chr16.472 Chr16 14356874 14358088 uncharacterized protein nan K13338
gene-evm.TU.Chr16.473 rna-evm.model.Chr16.473 Chr16 14431704 14434669 PREDICTED: Rab11 family-interacting protein 3/4 nan K10422
gene-evm.TU.Chr16.477 rna-evm.model.Chr16.477 Chr16 14508492 14511784 PREDICTED: Rab11 family-interacting protein 3/4 nan K16731
gene-evm.TU.Chr16.478 rna-evm.model.Chr16.478 Chr16 14522839 14526384 PREDICTED: coiled-coil domain-containing protein 39 nan K15909
gene-evm.TU.Chr16.479 rna-evm.model.Chr16.479 Chr16 14535154 14536327 PREDICTED: laminin, alpha 3/5 nan K06244
gene-evm.TU.Chr16.48 rna-evm.model.Chr16.48 Chr16 1342087 1372793 PREDICTED: Fibrinogen gamma chain nan K25537

For more detailed data, you can explore the Download section to access the full dataset.