CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr16.386 rna-evm.model.Chr16.386 Chr16 12291562 12293489 uncharacterized protein GO:0005515 K09667
gene-evm.TU.Chr16.388 rna-evm.model.Chr16.388 Chr16 12381125 12385235 PREDICTED: THAP domain-containing protein 11 GO:0003676 K23211
gene-evm.TU.Chr16.389 rna-evm.model.Chr16.389 Chr16 12387122 12410310 PREDICTED: inner nuclear membrane protein Man1 nan K21233
gene-evm.TU.Chr16.390 rna-evm.model.Chr16.390 Chr16 12410571 12412091 uncharacterized protein GO:0005515 K09667
gene-evm.TU.Chr16.391 rna-evm.model.Chr16.391 Chr16 12464759 12465477 uncharacterized protein nan K11803
gene-evm.TU.Chr16.392 rna-evm.model.Chr16.392 Chr16 12530760 12540562 uncharacterized protein nan nan
gene-evm.TU.Chr16.393 rna-evm.model.Chr16.393 Chr16 12541706 12542725 uncharacterized protein nan K24385
gene-evm.TU.Chr16.394 rna-evm.model.Chr16.394 Chr16 12545112 12546700 PREDICTED: ATP-dependent DNA helicase RecQ nan K03654
gene-evm.TU.Chr16.395 rna-evm.model.Chr16.395 Chr16 12684937 12685228 PREDICTED: Zinc finger and BTB domain-containing protein 49 GO:0003676 K24807
gene-evm.TU.Chr16.398 rna-evm.model.Chr16.398 Chr16 12689454 12691055 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.