CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr16.353 rna-evm.model.Chr16.353.1 Chr16 11184573 11201102 PREDICTED: Coiled-coil domain-containing protein 74A nan K16452
gene-evm.TU.Chr16.355 rna-evm.model.Chr16.355 Chr16 11229226 11241309 uncharacterized protein nan K26087
gene-evm.TU.Chr16.356 rna-evm.model.Chr16.356 Chr16 11245494 11253850 PREDICTED: Ribosome maturation protein SBDS GO:0042254 K14574
gene-evm.TU.Chr16.357 rna-evm.model.Chr16.357 Chr16 11257465 11265174 PREDICTED: Clathrin heavy chain 1 nan K04646
gene-evm.TU.Chr16.358_evm.TU.Chr16.359 rna-evm.model.Chr16.358_evm.model.Chr16.359 Chr16 11275090 11286380 PREDICTED: Armadillo repeat-containing protein 5 GO:0005515 K22499
gene-evm.TU.Chr16.362 rna-evm.model.Chr16.362 Chr16 11326188 11437540 PREDICTED: Glutamine-rich protein 2 nan K19607
gene-evm.TU.Chr16.363 rna-evm.model.Chr16.363 Chr16 11450312 11455469 PREDICTED: RNMT-activating mini protein nan K18708
gene-evm.TU.Chr16.364 rna-evm.model.Chr16.364 Chr16 11455451 11471848 PREDICTED: Cyclin-H nan K06634
gene-evm.TU.Chr16.365 rna-evm.model.Chr16.365 Chr16 11474516 11493310 PREDICTED: Ubiquitin-associated and SH3 domain-containing protein B nan K18993
gene-evm.TU.Chr16.366 rna-evm.model.Chr16.366 Chr16 11520891 11523735 uncharacterized protein GO:0042981 K02186

For more detailed data, you can explore the Download section to access the full dataset.