CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr16.231_evm.TU.Chr16.232 rna-evm.model.Chr16.231_evm.model.Chr16.232 Chr16 7252801 7753175 PREDICTED: Tetratricopeptide repeat protein 37 GO:0005515;GO:0006401;GO:0055087 K12600
gene-evm.TU.Chr16.233 rna-evm.model.Chr16.233 Chr16 7754153 7763381 PREDICTED: Malate dehydrogenase, mitochondrial GO:0016491;GO:0016616;GO:0055114 K00026
gene-evm.TU.Chr16.234 rna-evm.model.Chr16.234 Chr16 7763624 7772728 PREDICTED: Serine/threonine/tyrosine-interacting-like protein 1 GO:0006470;GO:0008138;GO:0016311 K18047
gene-evm.TU.Chr16.235 rna-evm.model.Chr16.235 Chr16 7779959 7806658 PREDICTED: Nitric oxide synthase, brain GO:0004517;GO:0005515;GO:0006809;GO:0010181;GO:0016491;GO:0055114 K13240
gene-evm.TU.Chr16.237 rna-evm.model.Chr16.237 Chr16 7865536 7866695 PREDICTED: Dynein light chain 1, cytoplasmic GO:0007017;GO:0030286 K10418
gene-evm.TU.Chr16.238 rna-evm.model.Chr16.238 Chr16 7872513 7873823 PREDICTED: Dynein light chain 2, cytoplasmic GO:0007017;GO:0030286 K10418
gene-evm.TU.Chr16.239 rna-evm.model.Chr16.239 Chr16 7876432 7883776 PREDICTED: Dynein light chain 2, cytoplasmic GO:0007017;GO:0030286 K10418
gene-evm.TU.Chr16.240 rna-evm.model.Chr16.240 Chr16 7890643 7890900 PREDICTED: Dynein light chain LC6, flagellar outer arm GO:0007017;GO:0030286 K10418
gene-evm.TU.Chr16.241 rna-evm.model.Chr16.241 Chr16 7893695 7893986 PREDICTED: Dynein light chain 2, cytoplasmic GO:0007017;GO:0030286 K10418
gene-evm.TU.Chr16.242 rna-evm.model.Chr16.242 Chr16 7899900 7902959 PREDICTED: Dynein light chain 2, cytoplasmic GO:0007017;GO:0030286 K10418

For more detailed data, you can explore the Download section to access the full dataset.