CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr16.2057 rna-evm.model.Chr16.2057 Chr16 62636768 62638632 PREDICTED: LIM/homeobox protein Lhx5 GO:0003677 K24900
gene-evm.TU.Chr16.2059_evm.TU.Chr16.2060 rna-evm.model.Chr16.2059_evm.model.Chr16.2060 Chr16 62652200 62686356 PREDICTED: C-type lectin domain family 4 member G nan K06721
gene-evm.TU.Chr16.2061 rna-evm.model.Chr16.2061 Chr16 62689356 62689966 uncharacterized protein nan K13907
gene-evm.TU.Chr16.2062 rna-evm.model.Chr16.2062 Chr16 62694424 62716482 PREDICTED: Ladderlectin nan K06563
gene-evm.TU.Chr16.2065 rna-evm.model.Chr16.2065 Chr16 62733094 62734402 PREDICTED: Uncharacterized protein F36G3.2 nan K00657
gene-evm.TU.Chr16.2066 rna-evm.model.Chr16.2066 Chr16 62741534 62742914 PREDICTED: Uncharacterized protein F36G3.2 nan K03789
gene-evm.TU.Chr16.2067 rna-evm.model.Chr16.2067 Chr16 62749490 62755048 PREDICTED: Uncharacterized protein F36G3.2 nan K03789
gene-evm.TU.Chr16.2068 rna-evm.model.Chr16.2068 Chr16 62783523 62786435 PREDICTED: monocarboxylate transporter 4-like nan K11810
gene-evm.TU.Chr16.207 rna-evm.model.Chr16.207 Chr16 6821231 6822980 PREDICTED: protein kinase D [EC:2.7.11.13] nan K24246
gene-evm.TU.Chr16.2072 rna-evm.model.Chr16.2072 Chr16 62814367 62815440 PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] GO:0016977 K04437

For more detailed data, you can explore the Download section to access the full dataset.