CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr16.1923 rna-evm.model.Chr16.1923 Chr16 59184803 59188918 PREDICTED: solute carrier family 15, member 5 nan K25635
gene-evm.TU.Chr16.1925 rna-evm.model.Chr16.1925 Chr16 59436519 59438156 PREDICTED: Protein ABHD15 nan K13707
gene-evm.TU.Chr16.1926 rna-evm.model.Chr16.1926 Chr16 59537995 59539554 uncharacterized protein nan nan
gene-evm.TU.Chr16.1929 rna-evm.model.Chr16.1929 Chr16 59565849 59566507 PREDICTED: arginine-glutamic acid dipeptide repeats protein nan nan
gene-evm.TU.Chr16.193 rna-evm.model.Chr16.193 Chr16 6443052 6457016 uncharacterized protein nan K07218
gene-evm.TU.Chr16.1930 rna-evm.model.Chr16.1930 Chr16 59597378 59597845 PREDICTED: coatomer subunit beta' nan K09736
gene-evm.TU.Chr16.1931 rna-evm.model.Chr16.1931 Chr16 59606785 59607778 PREDICTED: protein kinase D [EC:2.7.11.13] nan K07164
gene-evm.TU.Chr16.1932 rna-evm.model.Chr16.1932 Chr16 59654449 59655351 PREDICTED: sentrin-specific protease 1 [EC:3.4.22.68] nan K19395
gene-evm.TU.Chr16.1933 rna-evm.model.Chr16.1933 Chr16 59681324 59682330 PREDICTED: Zinc finger MYM-type protein 1 nan K24674
gene-evm.TU.Chr16.1934 rna-evm.model.Chr16.1934 Chr16 59683104 59686329 PREDICTED: 52 kDa repressor of the inhibitor of the protein kinase nan K24674

For more detailed data, you can explore the Download section to access the full dataset.