CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr16.1776 rna-evm.model.Chr16.1776 Chr16 55125467 55126083 uncharacterized protein nan K22159
gene-evm.TU.Chr16.1777 rna-evm.model.Chr16.1777 Chr16 55126115 55138231 uncharacterized protein nan nan
gene-evm.TU.Chr16.1778 rna-evm.model.Chr16.1778 Chr16 55138537 55216772 PREDICTED: L-type lectin-domain containing receptor kinase I.8 GO:0004672;GO:0005515;GO:0005524;GO:0006468;GO:0007165 K00924
gene-evm.TU.Chr16.1779_evm.TU.Chr16.1780 rna-evm.model.Chr16.1779_evm.model.Chr16.1780 Chr16 55229222 55319531 PREDICTED: Putative L-type lectin-domain containing receptor kinase I.11 GO:0004672;GO:0005515;GO:0005524;GO:0006468;GO:0007165;GO:0042981 K04733
gene-evm.TU.Chr16.178 rna-evm.model.Chr16.178 Chr16 6099767 6104339 uncharacterized protein nan K17834
gene-evm.TU.Chr16.1781 rna-evm.model.Chr16.1781 Chr16 55327542 55351749 PREDICTED: N-lysine methyltransferase KMT5A GO:0005515 K11428
gene-evm.TU.Chr16.1782 rna-evm.model.Chr16.1782 Chr16 55379995 55381068 PREDICTED: kelch-like protein 33 nan K25448
gene-evm.TU.Chr16.1783 rna-evm.model.Chr16.1783 Chr16 55381294 55390077 uncharacterized protein nan K26653
gene-evm.TU.Chr16.1784 rna-evm.model.Chr16.1784 Chr16 55406885 55457187 PREDICTED: Serine/threonine-protein kinase-like protein At3g51990 GO:0004672;GO:0005524;GO:0006468 K20872
gene-evm.TU.Chr16.1786 rna-evm.model.Chr16.1786 Chr16 55576971 55577414 uncharacterized protein nan K19537

For more detailed data, you can explore the Download section to access the full dataset.