CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr16.16 rna-evm.model.Chr16.16 Chr16 545762 549962 uncharacterized protein nan K08114
gene-evm.TU.Chr16.160 rna-evm.model.Chr16.160 Chr16 5483170 5498326 PREDICTED: Tectonic-2 nan K19361
gene-evm.TU.Chr16.1601 rna-evm.model.Chr16.1601 Chr16 49950352 49954280 uncharacterized protein nan nan
gene-evm.TU.Chr16.1602 rna-evm.model.Chr16.1602 Chr16 49999112 50002404 PREDICTED: Mitochondrial import inner membrane translocase subunit Tim10 GO:0042719;GO:0045039 K17778
gene-evm.TU.Chr16.1603 rna-evm.model.Chr16.1603 Chr16 50168142 50199064 PREDICTED: Activity-dependent neuroprotector homeobox protein GO:0003676;GO:0003677 K22402
gene-evm.TU.Chr16.1604 rna-evm.model.Chr16.1604 Chr16 50212521 50218630 PREDICTED: Glutathione S-transferase theta-1 GO:0005515 K00799
gene-evm.TU.Chr16.1605 rna-evm.model.Chr16.1605 Chr16 50221000 50237066 PREDICTED: Glutathione S-transferase theta-2 GO:0005515 K00799
gene-evm.TU.Chr16.1606 rna-evm.model.Chr16.1606 Chr16 50241783 50248380 PREDICTED: Glutathione S-transferase theta-1 GO:0005515 K00799
gene-evm.TU.Chr16.1607 rna-evm.model.Chr16.1607 Chr16 50264281 50272924 PREDICTED: Glutathione S-transferase theta-1 GO:0005515 K00799
gene-evm.TU.Chr16.1608 rna-evm.model.Chr16.1608 Chr16 50286973 50288160 uncharacterized protein nan K20444

For more detailed data, you can explore the Download section to access the full dataset.