CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr16.1268 rna-evm.model.Chr16.1268 Chr16 38844487 38846449 PREDICTED: Heat shock 70 kDa protein 12A nan K04043
gene-evm.TU.Chr16.1269 rna-evm.model.Chr16.1269 Chr16 38847884 38850192 PREDICTED: Heat shock 70 kDa protein 12B nan K04046
gene-evm.TU.Chr16.127 rna-evm.model.Chr16.127 Chr16 4040567 4041901 PREDICTED: G-protein coupled receptor 161 GO:0004930;GO:0007186;GO:0016020 K08439
gene-evm.TU.Chr16.1270 rna-evm.model.Chr16.1270 Chr16 38861110 38867120 PREDICTED: Heat shock 70 kDa protein 12A nan K04043
gene-evm.TU.Chr16.1272 rna-evm.model.Chr16.1272 Chr16 38885085 38889298 PREDICTED: Histone-lysine N-methyltransferase SETMAR nan K06283
gene-evm.TU.Chr16.1273 rna-evm.model.Chr16.1273 Chr16 38897241 38904420 PREDICTED: Heat shock 70 kDa protein 12A nan K04043
gene-evm.TU.Chr16.1274 rna-evm.model.Chr16.1274 Chr16 38919993 38976693 PREDICTED: Heat shock 70 kDa protein 12A GO:0005515 K04043
gene-evm.TU.Chr16.1275 rna-evm.model.Chr16.1275 Chr16 38980404 38983050 PREDICTED: Agrin GO:0005515 K06254
gene-evm.TU.Chr16.1276 rna-evm.model.Chr16.1276 Chr16 38989360 39016152 PREDICTED: Synergin gamma GO:0005515 K25219
gene-evm.TU.Chr16.1277 rna-evm.model.Chr16.1277 Chr16 39029009 39048670 PREDICTED: SANT/Myb domain nan K20047

For more detailed data, you can explore the Download section to access the full dataset.