CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.894 rna-evm.model.Chr15.894 Chr15 26021120 26037331 PREDICTED: 2-aminomuconic semialdehyde dehydrogenase GO:0016491;GO:0055114 K23234
gene-evm.TU.Chr15.895 rna-evm.model.Chr15.895 Chr15 26045341 26047390 uncharacterized protein nan K25727
gene-evm.TU.Chr15.896 rna-evm.model.Chr15.896 Chr15 26050887 26063902 PREDICTED: Atrial natriuretic peptide receptor 2 GO:0009190;GO:0016849;GO:0035556 K12324
gene-evm.TU.Chr15.897 rna-evm.model.Chr15.897 Chr15 26079290 26080756 PREDICTED: Beta-1,2-xylosyltransferase RCN11 GO:0016757 K03714
gene-evm.TU.Chr15.898 rna-evm.model.Chr15.898 Chr15 26089024 26113993 PREDICTED: Ankyrin-2 GO:0005515 K21439
gene-evm.TU.Chr15.899 rna-evm.model.Chr15.899 Chr15 26113974 26120975 PREDICTED: BTB/POZ domain-containing protein 2 GO:0005515 K10478
gene-evm.TU.Chr15.9 rna-evm.model.Chr15.9 Chr15 268167 269177 PREDICTED: galactose-3-O-sulfotransferase 2 [EC:2.8.2.-] nan K09676
gene-evm.TU.Chr15.90 rna-evm.model.Chr15.90 Chr15 1972946 1977785 PREDICTED: ER membrane protein complex subunit 3 GO:0016020 K23564
gene-evm.TU.Chr15.901 rna-evm.model.Chr15.901 Chr15 26151563 26164261 uncharacterized protein GO:0005576;GO:0006030;GO:0008061 K11244
gene-evm.TU.Chr15.902 rna-evm.model.Chr15.902 Chr15 26208085 26208720 PREDICTED: Sarcoplasmic calcium-binding protein GO:0005509 K15825

For more detailed data, you can explore the Download section to access the full dataset.