CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.775 rna-evm.model.Chr15.775 Chr15 22069307 22084430 PREDICTED: Adiponectin receptor protein GO:0016020 K07297
gene-evm.TU.Chr15.776 rna-evm.model.Chr15.776 Chr15 22087524 22095836 PREDICTED: 39S ribosomal protein L46, mitochondrial GO:0003735;GO:0016787 K17427
gene-evm.TU.Chr15.777 rna-evm.model.Chr15.777 Chr15 22096481 22117165 PREDICTED: CXXC-type zinc finger protein 1 GO:0003677;GO:0008270;GO:0048188 K14960
gene-evm.TU.Chr15.778 rna-evm.model.Chr15.778 Chr15 22126254 22131026 PREDICTED: Probable glutathione S-transferase 8 GO:0005515 K04097
gene-evm.TU.Chr15.779 rna-evm.model.Chr15.779 Chr15 22134335 22140223 PREDICTED: Probable glutathione S-transferase 7 GO:0005515 K04097
gene-evm.TU.Chr15.78 rna-evm.model.Chr15.78 Chr15 1666530 1672924 PREDICTED: Alanine aminotransferase 2 GO:0009058;GO:0030170 K00814
gene-evm.TU.Chr15.781 rna-evm.model.Chr15.781 Chr15 22151047 22164671 PREDICTED: PR domain zinc finger protein 14 GO:0003676;GO:0005515 K24646
gene-evm.TU.Chr15.782 rna-evm.model.Chr15.782 Chr15 22172760 22174675 PREDICTED: Death-associated inhibitor of apoptosis 2 nan K16060
gene-evm.TU.Chr15.783 rna-evm.model.Chr15.783 Chr15 22191659 22192537 PREDICTED: Death-associated inhibitor of apoptosis 2 nan K16060
gene-evm.TU.Chr15.784 rna-evm.model.Chr15.784 Chr15 22210417 22211301 PREDICTED: Death-associated inhibitor of apoptosis 2 nan K16060

For more detailed data, you can explore the Download section to access the full dataset.