CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.732 rna-evm.model.Chr15.732 Chr15 20960382 20974921 uncharacterized protein nan K19850
gene-evm.TU.Chr15.733 rna-evm.model.Chr15.733 Chr15 20991558 20996368 PREDICTED: BLOC-1-related complex subunit 6 nan K20820
gene-evm.TU.Chr15.734 rna-evm.model.Chr15.734 Chr15 20996869 21000093 PREDICTED: BLOC-1 related complex subunit 6 nan K20820
gene-evm.TU.Chr15.735 rna-evm.model.Chr15.735 Chr15 21001524 21003126 PREDICTED: Caprin-2 nan K23284
gene-evm.TU.Chr15.737 rna-evm.model.Chr15.737 Chr15 21010435 21011819 PREDICTED: Heavy metal-binding protein HIP nan K23284
gene-evm.TU.Chr15.738 rna-evm.model.Chr15.738 Chr15 21014475 21032935 PREDICTED: Nucleolar protein 8 GO:0003676 K14836
gene-evm.TU.Chr15.74 rna-evm.model.Chr15.74 Chr15 1623649 1624119 PREDICTED: Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial GO:0006450 K02435
gene-evm.TU.Chr15.740 rna-evm.model.Chr15.740 Chr15 21052315 21055414 PREDICTED: Plasminogen (Fragment) nan K09644
gene-evm.TU.Chr15.742 rna-evm.model.Chr15.742 Chr15 21063767 21078361 PREDICTED: Sodium- and chloride-dependent glycine transporter 1 GO:0016020 K05038
gene-evm.TU.Chr15.743 rna-evm.model.Chr15.743 Chr15 21086141 21088962 PREDICTED: complement component 4 nan K12775

For more detailed data, you can explore the Download section to access the full dataset.