CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.721_evm.TU.Chr15.720 rna-evm.model.Chr15.721_evm.model.Chr15.720 Chr15 20580208 20711148 PREDICTED: Voltage-dependent calcium channel type D subunit alpha-1 GO:0005216;GO:0005245;GO:0005891;GO:0006811;GO:0016020;GO:0055085;GO:0070588 K04850
gene-evm.TU.Chr15.722 rna-evm.model.Chr15.722 Chr15 20743571 20745375 PREDICTED: Periostin nan K19519
gene-evm.TU.Chr15.723 rna-evm.model.Chr15.723 Chr15 20746878 20759367 PREDICTED: EF-hand calcium-binding domain-containing protein 1 GO:0005509 K13448
gene-evm.TU.Chr15.724 rna-evm.model.Chr15.724 Chr15 20761627 20767594 PREDICTED: C1q-related factor nan K23284
gene-evm.TU.Chr15.725 rna-evm.model.Chr15.725 Chr15 20768965 20814016 PREDICTED: Glycine-rich domain-containing protein 2 nan K12598
gene-evm.TU.Chr15.726 rna-evm.model.Chr15.726 Chr15 20822032 20825446 PREDICTED: Protein stum homolog nan K06087
gene-evm.TU.Chr15.728 rna-evm.model.Chr15.728 Chr15 20879756 20891048 uncharacterized protein nan K07523
gene-evm.TU.Chr15.729 rna-evm.model.Chr15.729 Chr15 20909656 20916946 uncharacterized protein nan nan
gene-evm.TU.Chr15.730 rna-evm.model.Chr15.730 Chr15 20925530 20926497 uncharacterized protein nan nan
gene-evm.TU.Chr15.731 rna-evm.model.Chr15.731 Chr15 20933199 20949758 uncharacterized protein nan K06547

For more detailed data, you can explore the Download section to access the full dataset.