CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.683_evm.TU.Chr15.684 rna-evm.model.Chr15.683_evm.model.Chr15.684 Chr15 19980498 19997801 PREDICTED: Phytanoyl-CoA dioxygenase, peroxisomal nan K00477
gene-evm.TU.Chr15.685 rna-evm.model.Chr15.685 Chr15 20034134 20052228 PREDICTED: TBC1 domain family member 25 nan K24799
gene-evm.TU.Chr15.688 rna-evm.model.Chr15.688 Chr15 20126136 20159859 PREDICTED: TBC1 domain family member 25 nan K24799
gene-evm.TU.Chr15.689 rna-evm.model.Chr15.689 Chr15 20163727 20196696 PREDICTED: Protein DENND6B GO:0005085 K18708
gene-evm.TU.Chr15.690_evm.TU.Chr15.691 rna-evm.model.Chr15.690_evm.model.Chr15.691 Chr15 20219092 20228696 PREDICTED: Caveolin-1 GO:0070836 K12959
gene-evm.TU.Chr15.692 rna-evm.model.Chr15.692 Chr15 20232098 20233180 PREDICTED: Caveolin-1 GO:0070836 K12959
gene-evm.TU.Chr15.693 rna-evm.model.Chr15.693 Chr15 20238801 20240018 PREDICTED: Caveolin-1 GO:0070836 K12959
gene-evm.TU.Chr15.694 rna-evm.model.Chr15.694 Chr15 20241940 20242905 PREDICTED: Caveolin-1 GO:0070836 K12959
gene-evm.TU.Chr15.695 rna-evm.model.Chr15.695 Chr15 20244164 20251785 PREDICTED: Caveolin-1 GO:0070836 K12959
gene-evm.TU.Chr15.696 rna-evm.model.Chr15.696 Chr15 20252986 20254155 PREDICTED: Caveolin-1 GO:0070836 K12959

For more detailed data, you can explore the Download section to access the full dataset.