CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.58 rna-evm.model.Chr15.58 Chr15 1422448 1423034 PREDICTED: U3 small nucleolar RNA-associated protein 19 nan K05220
gene-evm.TU.Chr15.580 rna-evm.model.Chr15.580 Chr15 16744681 16758820 PREDICTED: THO complex subunit 7 homolog GO:0000445;GO:0006397 K13176
gene-evm.TU.Chr15.581 rna-evm.model.Chr15.581 Chr15 16759296 16781593 PREDICTED: Ataxin-7-like protein 1 nan K11318
gene-evm.TU.Chr15.582 rna-evm.model.Chr15.582 Chr15 16809724 16810635 PREDICTED: Triose phosphate/phosphate translocator, chloroplastic nan K15283
gene-evm.TU.Chr15.583 rna-evm.model.Chr15.583 Chr15 16820289 16822942 PREDICTED: Triose phosphate/phosphate translocator, chloroplastic nan K15283
gene-evm.TU.Chr15.584 rna-evm.model.Chr15.584 Chr15 16835740 16854436 PREDICTED: Ephexin-1 GO:0005085;GO:0005515;GO:0035023 K07525
gene-evm.TU.Chr15.585 rna-evm.model.Chr15.585 Chr15 16863319 16886412 PREDICTED: Universal stress protein Sll1388 nan K14061
gene-evm.TU.Chr15.586 rna-evm.model.Chr15.586.1 Chr15 16888946 16894357 PREDICTED: Universal stress protein MJ0577 nan K14061
gene-evm.TU.Chr15.587 rna-evm.model.Chr15.587 Chr15 16895406 16899201 PREDICTED: Universal stress protein Sll1388 nan K06149
gene-evm.TU.Chr15.588 rna-evm.model.Chr15.588 Chr15 16900762 16901379 uncharacterized protein nan K26671

For more detailed data, you can explore the Download section to access the full dataset.