CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.56 rna-evm.model.Chr15.56 Chr15 1388447 1393440 PREDICTED: Putative nuclease HARBI1 nan K23222
gene-evm.TU.Chr15.560 rna-evm.model.Chr15.560 Chr15 15711370 15718055 uncharacterized protein nan nan
gene-evm.TU.Chr15.561_evm.TU.Chr15.562 rna-evm.model.Chr15.561_evm.model.Chr15.562 Chr15 15725829 15758815 PREDICTED: Multiple epidermal growth factor-like domains protein 6 nan K19013
gene-evm.TU.Chr15.563 rna-evm.model.Chr15.563 Chr15 15761119 15859051 PREDICTED: Tenascin-X GO:0007154;GO:0016020 K20994
gene-evm.TU.Chr15.564 rna-evm.model.Chr15.564 Chr15 15945620 15949497 uncharacterized protein nan K13851
gene-evm.TU.Chr15.565 rna-evm.model.Chr15.565 Chr15 15952730 15957230 uncharacterized protein nan K24610
gene-evm.TU.Chr15.566 rna-evm.model.Chr15.566 Chr15 15994796 15995756 uncharacterized protein nan nan
gene-evm.TU.Chr15.567 rna-evm.model.Chr15.567 Chr15 15996752 15997171 PREDICTED: Zinc finger protein 625 GO:0003676 K22534
gene-evm.TU.Chr15.568 rna-evm.model.Chr15.568 Chr15 16049172 16066316 PREDICTED: Putative apolipoprotein(a)-like protein 2 nan K09644
gene-evm.TU.Chr15.569 rna-evm.model.Chr15.569 Chr15 16080768 16136744 PREDICTED: Hepatocyte growth factor nan K05460

For more detailed data, you can explore the Download section to access the full dataset.