CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.570 rna-evm.model.Chr15.570 Chr15 16168306 16169679 uncharacterized protein nan nan
gene-evm.TU.Chr15.571 rna-evm.model.Chr15.571 Chr15 16178201 16189351 PREDICTED: Dynein heavy chain-like protein PF11_0240 nan K18616
gene-evm.TU.Chr15.572 rna-evm.model.Chr15.572.1 Chr15 16192116 16212797 PREDICTED: Protein bicaudal D homolog 2 GO:0008093;GO:0070840 K18739
gene-evm.TU.Chr15.573 rna-evm.model.Chr15.573 Chr15 16235295 16238239 PREDICTED: Transmembrane protein 187 nan K10547
gene-evm.TU.Chr15.574 rna-evm.model.Chr15.574 Chr15 16239541 16270281 PREDICTED: ADP-ribosylation factor-like protein 8B GO:0005525;GO:0051015 K07955
gene-evm.TU.Chr15.575 rna-evm.model.Chr15.575 Chr15 16284692 16291558 PREDICTED: Gelsolin-like protein 2 GO:0051015 K05768
gene-evm.TU.Chr15.576 rna-evm.model.Chr15.576 Chr15 16299600 16338055 PREDICTED: Kinesin-like protein KIN-14E GO:0003777;GO:0005524;GO:0007018;GO:0008017;GO:0008569 K10406
gene-evm.TU.Chr15.577 rna-evm.model.Chr15.577 Chr15 16380989 16407600 uncharacterized protein nan K13100
gene-evm.TU.Chr15.578 rna-evm.model.Chr15.578 Chr15 16412066 16548340 PREDICTED: Uncharacterized protein FLJ43738 nan K02963
gene-evm.TU.Chr15.579 rna-evm.model.Chr15.579 Chr15 16582650 16739683 PREDICTED: Uncharacterized protein FLJ43738 nan nan

For more detailed data, you can explore the Download section to access the full dataset.