CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.354 rna-evm.model.Chr15.354 Chr15 10108343 10164299 PREDICTED: Fanconi anemia group D2 protein GO:0006281 K10891
gene-evm.TU.Chr15.355 rna-evm.model.Chr15.355 Chr15 10193904 10218582 PREDICTED: F-box and WD-40 domain protein 7 nan K05802
gene-evm.TU.Chr15.357 rna-evm.model.Chr15.357 Chr15 10261104 10282789 PREDICTED: Flap endonuclease GEN homolog 1 GO:0004518;GO:0006281 K15338
gene-evm.TU.Chr15.358 rna-evm.model.Chr15.358 Chr15 10283766 10289871 PREDICTED: histidine-rich glycoprotein-like nan K12026
gene-evm.TU.Chr15.359 rna-evm.model.Chr15.359 Chr15 10289824 10296080 PREDICTED: Glycine-rich domain-containing protein 2 nan K12598
gene-evm.TU.Chr15.36 rna-evm.model.Chr15.36 Chr15 1064126 1065328 PREDICTED: S-layer protein B nan K06675
gene-evm.TU.Chr15.360 rna-evm.model.Chr15.360 Chr15 10307534 10327507 PREDICTED: Cysteine-rich motor neuron 1 protein GO:0005515 K24522
gene-evm.TU.Chr15.361 rna-evm.model.Chr15.361 Chr15 10331329 10337880 PREDICTED: Glutathione S-transferase Mu 5 GO:0005515 K23790
gene-evm.TU.Chr15.362 rna-evm.model.Chr15.362 Chr15 10339944 10348426 PREDICTED: Glutathione S-transferase Mu 5 GO:0005515 K23790
gene-evm.TU.Chr15.363 rna-evm.model.Chr15.363 Chr15 10350494 10358669 PREDICTED: Glutathione S-transferase Mu 5 GO:0005515 K23790

For more detailed data, you can explore the Download section to access the full dataset.