CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.266 rna-evm.model.Chr15.266 Chr15 7904793 7921765 PREDICTED: Bacterial dynamin-like protein GO:0004672;GO:0005524;GO:0006468 K21356
gene-evm.TU.Chr15.267 rna-evm.model.Chr15.267 Chr15 7927966 7940382 PREDICTED: Bacterial dynamin-like protein GO:0004672;GO:0005524;GO:0006468 K21356
gene-evm.TU.Chr15.268 rna-evm.model.Chr15.268 Chr15 7953177 7961069 PREDICTED: Bacterial dynamin-like protein GO:0004672;GO:0005524;GO:0006468 K21356
gene-evm.TU.Chr15.269 rna-evm.model.Chr15.269 Chr15 7963575 7972734 PREDICTED: Bacterial dynamin-like protein GO:0004672;GO:0005524;GO:0006468 K21356
gene-evm.TU.Chr15.27 rna-evm.model.Chr15.27 Chr15 743205 748381 PREDICTED: BTB/POZ domain-containing protein 6 GO:0005515 K10478
gene-evm.TU.Chr15.270 rna-evm.model.Chr15.270 Chr15 7981777 7982496 uncharacterized protein nan nan
gene-evm.TU.Chr15.272 rna-evm.model.Chr15.272 Chr15 8012062 8018362 PREDICTED: Protein rolling stone nan K02668
gene-evm.TU.Chr15.273 rna-evm.model.Chr15.273 Chr15 8031609 8051951 PREDICTED: S-adenosylmethionine sensor upstream of mTORC1 nan K18849
gene-evm.TU.Chr15.274 rna-evm.model.Chr15.274 Chr15 8053944 8122682 PREDICTED: Forkhead box protein P1 GO:0003700;GO:0006355;GO:0043565 K23582
gene-evm.TU.Chr15.275 rna-evm.model.Chr15.275 Chr15 8165886 8167181 PREDICTED: Forkhead box protein I1 GO:0003700;GO:0006355;GO:0043565 K09405

For more detailed data, you can explore the Download section to access the full dataset.