CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.237 rna-evm.model.Chr15.237 Chr15 7033731 7037490 PREDICTED: Putative nuclease HARBI1 nan K23222
gene-evm.TU.Chr15.239 rna-evm.model.Chr15.239 Chr15 7129631 7158416 PREDICTED: MYCBP-associated protein nan K25648
gene-evm.TU.Chr15.24 rna-evm.model.Chr15.24 Chr15 717075 721571 uncharacterized protein GO:0042981 K02084
gene-evm.TU.Chr15.240 rna-evm.model.Chr15.240 Chr15 7162973 7167019 uncharacterized protein nan nan
gene-evm.TU.Chr15.242 rna-evm.model.Chr15.242 Chr15 7194266 7197784 PREDICTED: Ras-related protein Rab-7L1 GO:0003924;GO:0005525 K07916
gene-evm.TU.Chr15.243 rna-evm.model.Chr15.243 Chr15 7206101 7210447 uncharacterized protein nan nan
gene-evm.TU.Chr15.244 rna-evm.model.Chr15.244.4 Chr15 7212685 7311086 PREDICTED: Ankyrin repeat domain-containing protein 26 GO:0005515 K25138
gene-evm.TU.Chr15.245 rna-evm.model.Chr15.245 Chr15 7356095 7394753 PREDICTED: Glycine-rich domain-containing protein 1 nan K12598
gene-evm.TU.Chr15.246 rna-evm.model.Chr15.246 Chr15 7404405 7404944 uncharacterized protein nan nan
gene-evm.TU.Chr15.247 rna-evm.model.Chr15.247.1 Chr15 7415155 7426557 PREDICTED: Cysteine-rich with EGF-like domain protein 2 GO:0005509 K24335

For more detailed data, you can explore the Download section to access the full dataset.