CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.1940 rna-evm.model.Chr15.1940 Chr15 57867139 57869577 uncharacterized protein GO:0003676 K11238
gene-evm.TU.Chr15.1941 rna-evm.model.Chr15.1941 Chr15 57873463 57911052 PREDICTED: Ubiquitin-like modifier-activating enzyme 1 GO:0036211;GO:0008641 K03178
gene-evm.TU.Chr15.1942 rna-evm.model.Chr15.1942 Chr15 57922898 57929161 PREDICTED: Neurocan core protein nan K16681
gene-evm.TU.Chr15.1944 rna-evm.model.Chr15.1944 Chr15 57953626 57967265 PREDICTED: leucine-rich repeats and death domain-containing protein GO:0005515;GO:0007165 K02861
gene-evm.TU.Chr15.1945 rna-evm.model.Chr15.1945 Chr15 57984837 57988231 uncharacterized protein GO:0042981 K12806
gene-evm.TU.Chr15.1946 rna-evm.model.Chr15.1946 Chr15 57989048 57993067 uncharacterized protein nan K02084
gene-evm.TU.Chr15.1947 rna-evm.model.Chr15.1947 Chr15 57994235 58023498 PREDICTED: Neuronal cell adhesion molecule nan K06756
gene-evm.TU.Chr15.1948 rna-evm.model.Chr15.1948 Chr15 58033137 58069978 PREDICTED: Neuroglian nan K06756
gene-evm.TU.Chr15.1949 rna-evm.model.Chr15.1949 Chr15 58082538 58087086 uncharacterized protein nan K02084
gene-evm.TU.Chr15.195 rna-evm.model.Chr15.195 Chr15 5761800 5764941 uncharacterized protein GO:0016020 K23896

For more detailed data, you can explore the Download section to access the full dataset.