CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.1740 rna-evm.model.Chr15.1740 Chr15 51463567 51470172 PREDICTED: Aggrecan core protein nan K06563
gene-evm.TU.Chr15.1741 rna-evm.model.Chr15.1741 Chr15 51483074 51495840 PREDICTED: Inhibitor of growth protein 3 nan K11319
gene-evm.TU.Chr15.1742 rna-evm.model.Chr15.1742 Chr15 51501457 51502956 PREDICTED: Caprin-2 nan K23284
gene-evm.TU.Chr15.1743 rna-evm.model.Chr15.1743 Chr15 51511205 51523952 PREDICTED: Probable cytochrome P450 CYP44 GO:0005506;GO:0016705;GO:0020037;GO:0055114 K17088
gene-evm.TU.Chr15.1744 rna-evm.model.Chr15.1744 Chr15 51528921 51540903 uncharacterized protein nan K10135
gene-evm.TU.Chr15.1745 rna-evm.model.Chr15.1745 Chr15 51541940 51563637 uncharacterized protein nan K10135
gene-evm.TU.Chr15.1746 rna-evm.model.Chr15.1746 Chr15 51570806 51571906 PREDICTED: Pyrokinin-1 receptor GO:0004930;GO:0007186;GO:0016020 K08428
gene-evm.TU.Chr15.1747 rna-evm.model.Chr15.1747 Chr15 51577119 51578219 PREDICTED: Pyrokinin-1 receptor GO:0004930;GO:0007186;GO:0016020 K08428
gene-evm.TU.Chr15.1748 rna-evm.model.Chr15.1748 Chr15 51601681 51611944 PREDICTED: C-C chemokine receptor type 1 GO:0004930;GO:0007186;GO:0016020 K08428
gene-evm.TU.Chr15.1749 rna-evm.model.Chr15.1749 Chr15 51613463 51627697 uncharacterized protein nan K13046

For more detailed data, you can explore the Download section to access the full dataset.