CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.1718 rna-evm.model.Chr15.1718 Chr15 50680525 50702132 PREDICTED: Galaxin nan K19636
gene-evm.TU.Chr15.1719 rna-evm.model.Chr15.1719 Chr15 50707267 50725652 PREDICTED: Galaxin nan K19636
gene-evm.TU.Chr15.1720 rna-evm.model.Chr15.1720 Chr15 50738100 50758305 PREDICTED: Prestin GO:0008271;GO:0008272;GO:0015116;GO:0016020;GO:0016020;GO:0055085 K14703
gene-evm.TU.Chr15.1721 rna-evm.model.Chr15.1721 Chr15 50875960 50894560 PREDICTED: Ankyrin repeat and KH domain-containing protein mask GO:0005515 K06867
gene-evm.TU.Chr15.1722 rna-evm.model.Chr15.1722 Chr15 51043695 51111510 PREDICTED: Prestin GO:0007605;GO:0008271;GO:0008272;GO:0015116;GO:0016020;GO:0016020;GO:0055085 K14703
gene-evm.TU.Chr15.1723 rna-evm.model.Chr15.1723 Chr15 51117311 51118992 uncharacterized protein nan nan
gene-evm.TU.Chr15.1724 rna-evm.model.Chr15.1724 Chr15 51175304 51177949 PREDICTED: Dopamine N-acetyltransferase nan K03789
gene-evm.TU.Chr15.1725 rna-evm.model.Chr15.1725 Chr15 51182549 51182950 PREDICTED: Dopamine N-acetyltransferase nan K03789
gene-evm.TU.Chr15.1726 rna-evm.model.Chr15.1726 Chr15 51183022 51183957 uncharacterized protein nan nan
gene-evm.TU.Chr15.1727 rna-evm.model.Chr15.1727 Chr15 51187027 51196649 PREDICTED: Ras-related protein Rab-7a GO:0003924;GO:0005525 K07897

For more detailed data, you can explore the Download section to access the full dataset.