CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.1686 rna-evm.model.Chr15.1686 Chr15 49627326 49631951 uncharacterized protein nan K05074
gene-evm.TU.Chr15.1687 rna-evm.model.Chr15.1687 Chr15 49648366 49649133 uncharacterized protein nan K11446
gene-evm.TU.Chr15.1689 rna-evm.model.Chr15.1689 Chr15 49662232 49685676 PREDICTED: Tyrosine-protein kinase Btk29A GO:0004672;GO:0005515;GO:0005524;GO:0006468;GO:0007165 K08844
gene-evm.TU.Chr15.169 rna-evm.model.Chr15.169 Chr15 4120041 4124852 PREDICTED: Myogenesis-regulating glycosidase GO:0004553;GO:0005975 K24727
gene-evm.TU.Chr15.1692 rna-evm.model.Chr15.1692 Chr15 49772990 49821552 PREDICTED: polyamine-modulated factor 1-binding protein 1 nan K04725
gene-evm.TU.Chr15.1693 rna-evm.model.Chr15.1693 Chr15 49830532 49854406 PREDICTED: WASH complex subunit 1 GO:0005769;GO:0034314;GO:0043014;GO:0071203 K18461
gene-evm.TU.Chr15.1694 rna-evm.model.Chr15.1694 Chr15 49861363 49882373 PREDICTED: Wnt inhibitory factor 1 nan K24469
gene-evm.TU.Chr15.1695 rna-evm.model.Chr15.1695 Chr15 49883881 49888342 uncharacterized protein nan K24190
gene-evm.TU.Chr15.1697 rna-evm.model.Chr15.1697 Chr15 49963606 49972417 PREDICTED: Calmodulin GO:0005509;GO:0019722 K02183
gene-evm.TU.Chr15.1698 rna-evm.model.Chr15.1698 Chr15 49976072 50015023 PREDICTED: Structural maintenance of chromosomes protein 1A GO:0003682;GO:0005515;GO:0005524;GO:0005694;GO:0006281;GO:0007064;GO:0008278;GO:0051276 K06636

For more detailed data, you can explore the Download section to access the full dataset.