CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.1613 rna-evm.model.Chr15.1613 Chr15 46705389 46705916 PREDICTED: E1A/CREB-binding protein [EC:2.3.1.48] nan K02107
gene-evm.TU.Chr15.1615 rna-evm.model.Chr15.1615.3 Chr15 46845500 46868304 PREDICTED: Universal stress protein MJ0531 nan K06149
gene-evm.TU.Chr15.1618 rna-evm.model.Chr15.1618 Chr15 47062246 47073490 uncharacterized protein nan nan
gene-evm.TU.Chr15.1619 rna-evm.model.Chr15.1619 Chr15 47075144 47168772 PREDICTED: Pleckstrin homology domain-containing family G member 7 GO:0005085;GO:0035023 K19464
gene-evm.TU.Chr15.162 rna-evm.model.Chr15.162 Chr15 3796045 3801312 uncharacterized protein nan nan
gene-evm.TU.Chr15.1621 rna-evm.model.Chr15.1621 Chr15 47256933 47264250 uncharacterized protein nan K07299
gene-evm.TU.Chr15.1622 rna-evm.model.Chr15.1622 Chr15 47265012 47267237 uncharacterized protein nan nan
gene-evm.TU.Chr15.1627 rna-evm.model.Chr15.1627 Chr15 47356419 47362017 PREDICTED: Ribonuclease P protein subunit p14 GO:0004540;GO:0008033 K14529
gene-evm.TU.Chr15.1628 rna-evm.model.Chr15.1628 Chr15 47362214 47362984 PREDICTED: UPF0739 protein C1orf74 homolog nan nan
gene-evm.TU.Chr15.1629 rna-evm.model.Chr15.1629 Chr15 47366465 47471571 PREDICTED: Dynein heavy chain 3, axonemal GO:0003777;GO:0005524;GO:0007018;GO:0030286 K10408

For more detailed data, you can explore the Download section to access the full dataset.