CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.1857 rna-evm.model.Chr14.1857 Chr14 55289389 55289781 PREDICTED: p24 family protein gamma-2 nan K16488
gene-evm.TU.Chr14.1860 rna-evm.model.Chr14.1860 Chr14 55348956 55352106 PREDICTED: N-lysine methyltransferase KMT5A-A GO:0005515 K11428
gene-evm.TU.Chr14.1862 rna-evm.model.Chr14.1862 Chr14 55360552 55361136 PREDICTED: Putative deoxyribonuclease TATDN2 GO:0016788 K03424
gene-evm.TU.Chr14.1863 rna-evm.model.Chr14.1863 Chr14 55368105 55368776 PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] nan nan
gene-evm.TU.Chr14.1865 rna-evm.model.Chr14.1865 Chr14 55381868 55388316 PREDICTED: Peroxisome biogenesis factor 10 nan K13346
gene-evm.TU.Chr14.1866 rna-evm.model.Chr14.1866 Chr14 55391407 55407450 PREDICTED: ZZ-type zinc finger-containing protein 3 GO:0008270 K24536
gene-evm.TU.Chr14.1869 rna-evm.model.Chr14.1869 Chr14 55491029 55493453 PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D GO:0003676;GO:0003677 K07494
gene-evm.TU.Chr14.187 rna-evm.model.Chr14.187 Chr14 6181136 6181672 PREDICTED: solute carrier family 15, member 5 nan K10719
gene-evm.TU.Chr14.1871 rna-evm.model.Chr14.1871 Chr14 55615573 55621764 uncharacterized protein nan nan
gene-evm.TU.Chr14.1878 rna-evm.model.Chr14.1878 Chr14 55692081 55693946 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.