CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.1800 rna-evm.model.Chr14.1800 Chr14 53518410 53518562 uncharacterized protein nan nan
gene-evm.TU.Chr14.1802 rna-evm.model.Chr14.1802 Chr14 53582654 53650746 uncharacterized protein nan K09334
gene-evm.TU.Chr14.1803 rna-evm.model.Chr14.1803 Chr14 53656095 53665406 PREDICTED: DBH-like monooxygenase protein 1 GO:0004497;GO:0005507;GO:0016715;GO:0055114 K00503
gene-evm.TU.Chr14.1804 rna-evm.model.Chr14.1804 Chr14 53676831 53677769 uncharacterized protein nan nan
gene-evm.TU.Chr14.1805 rna-evm.model.Chr14.1805 Chr14 53683010 53690588 uncharacterized protein nan K14317
gene-evm.TU.Chr14.1806 rna-evm.model.Chr14.1806 Chr14 53696647 53699037 PREDICTED: CUB and sushi domain-containing protein nan K19374
gene-evm.TU.Chr14.1807 rna-evm.model.Chr14.1807 Chr14 53699382 53717806 uncharacterized protein nan nan
gene-evm.TU.Chr14.1808 rna-evm.model.Chr14.1808 Chr14 53720435 53723170 PREDICTED: histone-lysine N-methyltransferase MLL3 [EC:2.1.1.43] nan K24295
gene-evm.TU.Chr14.181_evm.TU.Chr14.179 rna-evm.model.Chr14.181_evm.model.Chr14.179 Chr14 5874121 6017192 PREDICTED: TBC1 domain family member 2B nan K20166
gene-evm.TU.Chr14.1810 rna-evm.model.Chr14.1810 Chr14 53759431 53764247 PREDICTED: Lysyl oxidase homolog 3B GO:0005044;GO:0016020 K00280

For more detailed data, you can explore the Download section to access the full dataset.