CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.1359 rna-evm.model.Chr14.1359 Chr14 42589887 42598082 PREDICTED: U6 snRNA-associated Sm-like protein LSm2 GO:0006397 K12621
gene-evm.TU.Chr14.136 rna-evm.model.Chr14.136 Chr14 4682231 4683250 PREDICTED: Integrase/recombinase xerD homolog GO:0003677;GO:0006310;GO:0015074 K04763
gene-evm.TU.Chr14.1360 rna-evm.model.Chr14.1360 Chr14 42598312 42609812 PREDICTED: Proteasome subunit beta type-1-B GO:0004298;GO:0005839;GO:0051603 K02732
gene-evm.TU.Chr14.1361 rna-evm.model.Chr14.1361 Chr14 42613160 42618895 PREDICTED: Beta-lactamase domain-containing protein 2 nan K01467
gene-evm.TU.Chr14.1362 rna-evm.model.Chr14.1362 Chr14 42621088 42640372 PREDICTED: Beta-lactamase domain-containing protein 2 nan K17382
gene-evm.TU.Chr14.1364 rna-evm.model.Chr14.1364 Chr14 42664500 42664958 uncharacterized protein nan K22244
gene-evm.TU.Chr14.1365 rna-evm.model.Chr14.1365 Chr14 42671309 42672064 PREDICTED: C-type lectin domain family 10 member A nan K06563
gene-evm.TU.Chr14.1369 rna-evm.model.Chr14.1369 Chr14 42759287 42774450 PREDICTED: Cytochrome P450 1A1 GO:0005506;GO:0005540;GO:0007155;GO:0016705;GO:0020037;GO:0055114 K07408
gene-evm.TU.Chr14.1371 rna-evm.model.Chr14.1371 Chr14 42805492 42813163 PREDICTED: cysteinyl leukotriene receptor 1 GO:0016020 K08428
gene-evm.TU.Chr14.1372 rna-evm.model.Chr14.1372 Chr14 42828938 42832367 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.