CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.324 rna-evm.model.Chr13.324 Chr13 8929764 8944563 PREDICTED: Cadherin EGF LAG seven-pass G-type receptor 3 GO:0005509;GO:0007156;GO:0016020;GO:0098609 K16669
gene-evm.TU.Chr13.325 rna-evm.model.Chr13.325 Chr13 9006342 9010668 PREDICTED: Sulfotransferase family cytosolic 1B member 1 GO:0008146 K22523
gene-evm.TU.Chr13.326 rna-evm.model.Chr13.326 Chr13 9015446 9043473 PREDICTED: von Willebrand factor D and EGF domain-containing protein nan K18274
gene-evm.TU.Chr13.327 rna-evm.model.Chr13.327 Chr13 9044084 9057868 PREDICTED: Glutamate receptor ionotropic, delta-1 GO:0004970;GO:0005216;GO:0006811;GO:0016020;GO:0038023 K05198
gene-evm.TU.Chr13.328 rna-evm.model.Chr13.328 Chr13 9081659 9096459 PREDICTED: Glutamate receptor ionotropic, delta-1 GO:0004970;GO:0005216;GO:0006811;GO:0016020;GO:0038023 K05198
gene-evm.TU.Chr13.329 rna-evm.model.Chr13.329 Chr13 9102024 9113276 PREDICTED: Steroid 17-alpha-hydroxylase/17,20 lyase GO:0005506;GO:0016705;GO:0020037;GO:0055114 K07408
gene-evm.TU.Chr13.331 rna-evm.model.Chr13.331 Chr13 9115808 9127378 PREDICTED: Steroid 17-alpha-hydroxylase/17,20 lyase GO:0005506;GO:0016705;GO:0020037;GO:0055114 K07408
gene-evm.TU.Chr13.332 rna-evm.model.Chr13.332 Chr13 9126637 9142061 PREDICTED: Steroid 17-alpha-hydroxylase/17,20 lyase GO:0005506;GO:0016705;GO:0020037;GO:0055114 K07408
gene-evm.TU.Chr13.333 rna-evm.model.Chr13.333 Chr13 9152325 9163095 PREDICTED: Cytochrome P450 2U1 GO:0005506;GO:0016705;GO:0020037;GO:0055114 K07408
gene-evm.TU.Chr13.334 rna-evm.model.Chr13.334 Chr13 9193610 9197573 uncharacterized protein GO:0030431;GO:0032222;GO:0034235;GO:1903818 K04008

For more detailed data, you can explore the Download section to access the full dataset.