CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr12.701 rna-evm.model.Chr12.701 Chr12 22609828 22623610 PREDICTED: Calcitonin gene-related peptide type 1 receptor GO:0004888;GO:0004930;GO:0007166;GO:0007186;GO:0016020;GO:0016020 K04577
gene-evm.TU.Chr12.703 rna-evm.model.Chr12.703 Chr12 22744376 22747074 uncharacterized protein GO:0005509 K23901
gene-evm.TU.Chr12.704 rna-evm.model.Chr12.704 Chr12 22832633 22838291 uncharacterized protein nan K23855
gene-evm.TU.Chr12.705 rna-evm.model.Chr12.705 Chr12 22845827 22846240 PREDICTED: Collagen alpha-1(X) chain nan K23284
gene-evm.TU.Chr12.708 rna-evm.model.Chr12.708 Chr12 22912576 22934502 PREDICTED: Heavy metal-binding protein HIP nan K23284
gene-evm.TU.Chr12.709 rna-evm.model.Chr12.709 Chr12 22941495 22944312 PREDICTED: P2X purinoceptor 7 nan K05220
gene-evm.TU.Chr12.71 rna-evm.model.Chr12.71 Chr12 2639226 2658485 PREDICTED: fibroblast growth factor receptor 3 [EC:2.7.10.1] nan K03900
gene-evm.TU.Chr12.710 rna-evm.model.Chr12.710 Chr12 22951942 22952811 PREDICTED: Myomodulin neuropeptides 1 nan K10184
gene-evm.TU.Chr12.714 rna-evm.model.Chr12.714 Chr12 22973858 22981719 PREDICTED: Sulfotransferase 4A1 GO:0008146 K01016
gene-evm.TU.Chr12.715 rna-evm.model.Chr12.715 Chr12 22986840 22990166 PREDICTED: complement component 4 nan K12775

For more detailed data, you can explore the Download section to access the full dataset.