CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr12.157 rna-evm.model.Chr12.157 Chr12 4932607 4934806 PREDICTED: complement component 4 nan nan
gene-evm.TU.Chr12.1570 rna-evm.model.Chr12.1570 Chr12 50498967 50499968 PREDICTED: E1A/CREB-binding protein [EC:2.3.1.48] nan nan
gene-evm.TU.Chr12.1572 rna-evm.model.Chr12.1572 Chr12 50509220 50510143 PREDICTED: Mariner Mos1 transposase nan K07494
gene-evm.TU.Chr12.1573 rna-evm.model.Chr12.1573 Chr12 50632365 50632564 uncharacterized protein nan nan
gene-evm.TU.Chr12.1574 rna-evm.model.Chr12.1574 Chr12 50636954 50638685 uncharacterized protein nan K22784
gene-evm.TU.Chr12.1576 rna-evm.model.Chr12.1576 Chr12 50685470 50687138 PREDICTED: probable transcription factor PML nan K10054
gene-evm.TU.Chr12.158 rna-evm.model.Chr12.158 Chr12 4936728 4940055 PREDICTED: complement component 4 nan K21253
gene-evm.TU.Chr12.1582 rna-evm.model.Chr12.1582 Chr12 51034536 51036142 uncharacterized protein nan K06486
gene-evm.TU.Chr12.1585 rna-evm.model.Chr12.1585 Chr12 51088867 51089475 uncharacterized protein nan K18624
gene-evm.TU.Chr12.1586 rna-evm.model.Chr12.1586 Chr12 51144051 51145827 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.