CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.411 rna-evm.model.Chr10.411 Chr10 12906028 12908133 PREDICTED: sentrin-specific protease 1 [EC:3.4.22.68] nan K10060
gene-evm.TU.Chr10.412 rna-evm.model.Chr10.412 Chr10 12986851 12988014 PREDICTED: exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] nan K16308
gene-evm.TU.Chr10.414 rna-evm.model.Chr10.414 Chr10 13043894 13048023 uncharacterized protein nan nan
gene-evm.TU.Chr10.415 rna-evm.model.Chr10.415 Chr10 13048066 13049619 uncharacterized protein nan nan
gene-evm.TU.Chr10.419 rna-evm.model.Chr10.419 Chr10 13256023 13257196 PREDICTED: PX domain-containing protein kinase-like protein nan K07494
gene-evm.TU.Chr10.42 rna-evm.model.Chr10.42 Chr10 1508742 1509731 PREDICTED: coatomer subunit beta' nan K20283
gene-evm.TU.Chr10.420 rna-evm.model.Chr10.420 Chr10 13326268 13422008 PREDICTED: Sex peptide receptor GO:0004930;GO:0007186;GO:0008528;GO:0016020 K26203
gene-evm.TU.Chr10.421 rna-evm.model.Chr10.421 Chr10 13376950 13392045 PREDICTED: starch-binding domain-containing protein 1 nan K27016
gene-evm.TU.Chr10.422 rna-evm.model.Chr10.422 Chr10 13478371 13492212 PREDICTED: exocyst complex component 1 nan K21585
gene-evm.TU.Chr10.424 rna-evm.model.Chr10.424 Chr10 13790544 13807119 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.