CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.391 rna-evm.model.Chr10.391 Chr10 12332802 12335120 uncharacterized protein nan nan
gene-evm.TU.Chr10.392 rna-evm.model.Chr10.392 Chr10 12398307 12454249 PREDICTED: Golgi integral membrane protein 4 nan K23540
gene-evm.TU.Chr10.393 rna-evm.model.Chr10.393 Chr10 12459695 12462877 uncharacterized protein nan nan
gene-evm.TU.Chr10.394 rna-evm.model.Chr10.394 Chr10 12479096 12496169 uncharacterized protein nan K23360
gene-evm.TU.Chr10.395 rna-evm.model.Chr10.395 Chr10 12504908 12506244 uncharacterized protein nan K05230
gene-evm.TU.Chr10.396 rna-evm.model.Chr10.396 Chr10 12516298 12517670 uncharacterized protein nan nan
gene-evm.TU.Chr10.399 rna-evm.model.Chr10.399 Chr10 12593727 12595651 uncharacterized protein nan K21697
gene-evm.TU.Chr10.4 rna-evm.model.Chr10.4 Chr10 140879 141631 PREDICTED: centromere protein J nan K22768
gene-evm.TU.Chr10.40 rna-evm.model.Chr10.40 Chr10 1475959 1487588 PREDICTED: Y-box factor homolog GO:0003676 K09276
gene-evm.TU.Chr10.400 rna-evm.model.Chr10.400 Chr10 12624052 12634816 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.