CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr1.169 rna-evm.model.Chr1.169 Chr1 5515195 5527957 PREDICTED: Fibroblast growth factor 13 GO:0008083 K22413
gene-evm.TU.Chr1.1690 rna-evm.model.Chr1.1690 Chr1 53586878 53587354 uncharacterized protein nan nan
gene-evm.TU.Chr1.1691 rna-evm.model.Chr1.1691 Chr1 53636163 53647663 uncharacterized protein nan nan
gene-evm.TU.Chr1.1692 rna-evm.model.Chr1.1692 Chr1 53675092 53678200 uncharacterized protein nan nan
gene-evm.TU.Chr1.1693 rna-evm.model.Chr1.1693 Chr1 53678408 53688578 uncharacterized protein nan nan
gene-evm.TU.Chr1.1694 rna-evm.model.Chr1.1694 Chr1 53698806 53699422 uncharacterized protein GO:0008270 nan
gene-evm.TU.Chr1.1695 rna-evm.model.Chr1.1695 Chr1 53711291 53730525 uncharacterized protein nan nan
gene-evm.TU.Chr1.1696 rna-evm.model.Chr1.1696 Chr1 53747073 53786039 PREDICTED: titin [EC:2.7.11.1] nan K04528
gene-evm.TU.Chr1.1697 rna-evm.model.Chr1.1697 Chr1 53804233 53820119 PREDICTED: Prestin GO:0008271;GO:0008272;GO:0015116;GO:0016020;GO:0016020;GO:0055085 K14703
gene-evm.TU.Chr1.1699 rna-evm.model.Chr1.1699 Chr1 53862088 53862285 PREDICTED: myosin heavy chain nan K22257

For more detailed data, you can explore the Download section to access the full dataset.