CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.1607 rna-evm.model.Chr10.1607 Chr10 50844829 50851542 PREDICTED: Protein odd-skipped-related 2-A GO:0003676 K09215
gene-evm.TU.Chr10.1609 rna-evm.model.Chr10.1609 Chr10 50892279 50898432 uncharacterized protein nan nan
gene-evm.TU.Chr10.1612 rna-evm.model.Chr10.1612 Chr10 50976641 50977947 PREDICTED: Sex peptide receptor GO:0004930;GO:0007186;GO:0016020 K26200
gene-evm.TU.Chr10.1613 rna-evm.model.Chr10.1613 Chr10 50987799 50988977 PREDICTED: Sex peptide receptor GO:0004930;GO:0007186;GO:0016020 K26200
gene-evm.TU.Chr10.1614 rna-evm.model.Chr10.1614 Chr10 50997803 51001295 PREDICTED: Sex peptide receptor GO:0004930;GO:0007186;GO:0016020 K26200
gene-evm.TU.Chr10.1615 rna-evm.model.Chr10.1615 Chr10 51004466 51010623 PREDICTED: DNA-directed RNA polymerase II subunit RPB4 GO:0006352;GO:0030880 K03012
gene-evm.TU.Chr10.1616 rna-evm.model.Chr10.1616 Chr10 51015631 51021129 uncharacterized protein nan K26447
gene-evm.TU.Chr10.1617 rna-evm.model.Chr10.1617 Chr10 51021234 51022196 uncharacterized protein nan nan
gene-evm.TU.Chr10.1618 rna-evm.model.Chr10.1618 Chr10 51030080 51085612 PREDICTED: protein SFI1 nan K16489
gene-evm.TU.Chr10.1619 rna-evm.model.Chr10.1619 Chr10 51096813 51101196 PREDICTED: SCO-spondin GO:0005515 K24498

For more detailed data, you can explore the Download section to access the full dataset.