CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.1397 rna-evm.model.Chr10.1397 Chr10 44642529 44648875 PREDICTED: TAR DNA-binding protein 43 GO:0003676 K23600
gene-evm.TU.Chr10.1398 rna-evm.model.Chr10.1398 Chr10 44660365 44662716 PREDICTED: C1q-related factor nan K23284
gene-evm.TU.Chr10.1399 rna-evm.model.Chr10.1399 Chr10 44667019 44673197 PREDICTED: Protein HP-25 homolog 2 nan K23284
gene-evm.TU.Chr10.140 rna-evm.model.Chr10.140 Chr10 4928306 4928971 PREDICTED: Adhesive plaque matrix protein nan K23831
gene-evm.TU.Chr10.1400 rna-evm.model.Chr10.1400 Chr10 44675086 44678607 PREDICTED: C1q-related factor nan K23284
gene-evm.TU.Chr10.1401 rna-evm.model.Chr10.1401 Chr10 44683325 44693799 PREDICTED: 7SK snRNA methylphosphate capping enzyme GO:0008168 K15190
gene-evm.TU.Chr10.1403 rna-evm.model.Chr10.1403 Chr10 44695741 44697262 PREDICTED: Transmembrane protein C17orf113 nan K24642
gene-evm.TU.Chr10.1404 rna-evm.model.Chr10.1404 Chr10 44693846 44722208 uncharacterized protein nan K05038
gene-evm.TU.Chr10.1407 rna-evm.model.Chr10.1407 Chr10 44747576 44749458 PREDICTED: Zinc finger MYM-type protein 4 nan K24675
gene-evm.TU.Chr10.1408 rna-evm.model.Chr10.1408 Chr10 44759346 44760251 PREDICTED: Heat shock 70 kDa protein 12A nan K04043

For more detailed data, you can explore the Download section to access the full dataset.