CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr19.94 rna-evm.model.Chr19.94 Chr19 6161436 6199234 uncharacterized protein nan K23334
gene-evm.TU.Chr19.940 rna-evm.model.Chr19.940 Chr19 30960475 30961745 PREDICTED: alpha-tectorin nan K19262
gene-evm.TU.Chr19.941 rna-evm.model.Chr19.941 Chr19 30963379 30969841 PREDICTED: Methyltransferase-like protein 24 nan K16381
gene-evm.TU.Chr19.942 rna-evm.model.Chr19.942 Chr19 30974490 30982198 PREDICTED: WD repeat-containing protein 61 GO:0005515 K12602
gene-evm.TU.Chr19.944 rna-evm.model.Chr19.944 Chr19 30997091 31000869 uncharacterized protein nan K13052
gene-evm.TU.Chr19.945 rna-evm.model.Chr19.945 Chr19 31001694 31018136 PREDICTED: Uncharacterized protein pXO2-14/BXB0013/GBAA_pXO2_0013 nan K19957
gene-evm.TU.Chr19.949 rna-evm.model.Chr19.949 Chr19 31056274 31071505 PREDICTED: Carnosine N-methyltransferase nan K19787
gene-evm.TU.Chr19.95 rna-evm.model.Chr19.95 Chr19 6232018 6236337 PREDICTED: Cysteine-rich, acidic integral membrane protein nan K24489
gene-evm.TU.Chr19.950 rna-evm.model.Chr19.950 Chr19 31086639 31092703 PREDICTED: Tenascin-X nan K24333
gene-evm.TU.Chr19.951 rna-evm.model.Chr19.951 Chr19 31095006 31096734 PREDICTED: Scavenger receptor class F member 1 nan K24068

For more detailed data, you can explore the Download section to access the full dataset.