CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr19.952 rna-evm.model.Chr19.952 Chr19 31106980 31114801 uncharacterized protein nan nan
gene-evm.TU.Chr19.953 rna-evm.model.Chr19.953 Chr19 31241402 31241694 PREDICTED: collagen, type V/XI/XXIV/XXVII, alpha nan K23601
gene-evm.TU.Chr19.954 rna-evm.model.Chr19.954 Chr19 31274972 31281295 PREDICTED: Centrosomal protein POC5 nan K16483
gene-evm.TU.Chr19.955 rna-evm.model.Chr19.955 Chr19 31298961 31305021 PREDICTED: Tenascin-X nan K24318
gene-evm.TU.Chr19.956 rna-evm.model.Chr19.956 Chr19 31313944 31314587 uncharacterized protein nan K19966
gene-evm.TU.Chr19.958 rna-evm.model.Chr19.958 Chr19 31448384 31450004 uncharacterized protein nan K25874
gene-evm.TU.Chr19.961 rna-evm.model.Chr19.961 Chr19 31477715 31480656 uncharacterized protein nan K14700
gene-evm.TU.Chr19.962 rna-evm.model.Chr19.962 Chr19 31489324 31490948 uncharacterized protein nan K06776
gene-evm.TU.Chr19.966 rna-evm.model.Chr19.966 Chr19 31548806 31594320 PREDICTED: Multiple epidermal growth factor-like domains protein 6 GO:0007157 K24333
gene-evm.TU.Chr19.967 rna-evm.model.Chr19.967 Chr19 31600086 31604870 PREDICTED: Multiple epidermal growth factor-like domains protein 11 nan K24333

For more detailed data, you can explore the Download section to access the full dataset.