Clam Breeding Management and Digital information Analysis System(CBMDAS)

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Latest Projects and Publications

Project A:The Science of the total environment

hysiological and transcriptomic analysis provides new insights into osmoregulation mechanism of Ruditapes philippinarum under low and high salinity stress.

Project B: Comparative biochemistry and physiology.

The energy metabolism and transcriptomic responses of the Manila clam (Ruditapes philippinarum) under the low-temperature stress.

Project C: Fish & shellfish immunolog

Transcriptome analysis provides new insights into the immune response of Ruditapes philippinarum infected with Vibrio alginolyticus.

Project D: Biochemical genetics

Genome-Wide Identification and Characterization of MITF Genes in Ruditapes philippinarum and Their Involvement in the Immune Response to Vibrio anguillarum Infection.

Project E: BMC Genomics 23

Comparative transcriptomic analysis revealed dynamic changes of distinct classes of genes during development of the Manila clam (Ruditapes philippinarum).

Project F: Toxicology & pharmacology : CBP

Effects of high water temperature on physiology, survival, and resistance to high temperature air-exposure in the Manila clam Ruditapes philippinarum. Comparative biochemistry and physiology.

References

Citation of key resources used in this database:

Wang, J., Hu, J., Xu, Q., Chen, S., Bi, J., Huo, Z., Yan, X., & Nie, H. (2024). Extraction of melanin from the shell and mantle and activities of enzymes related to the melanin biosynthesis in the Ruditapes philippinarum. Aquaculture and Fisheries.
Tan, Y., Liu, L., Zhang, Y., Fang, L., Liu, Y., & Huo, Z. (2024). Geographic patterns and ecological adaptations of Manila clam (Ruditapes philippinarum) along the Chinese coast: Insights from migration dynamics and gene flow. Global Ecology and Conservation.
Zhang, Y., Nie, H., Huo, Z., & Yan, X. (2024). Heat hardening enhances the energy metabolism activity and oxidative defense ability of Manila clam Ruditapes philippinarum under different thermal stress. Aquaculture.
Huo, Z., Wang, Z., Li, D., Liu, K., Li, X., Fang, L., & Yan, X. (2024). Shell shape polymorphism analysis of the Manila clam Ruditapes philippinarum across different geographical populations in China. Frontiers in Marine Science.
Wang, Y., Dongdong, L., Zhang, H., Chen, J., Tang, Y., Nie, H., Huo, Z., & Yan, X. (2024). Transcriptome analysis of Manila clam (Ruditapes philippinarum) under Vibrio parahaemolyticus challenge in a low-salinity environment provides molecular insights into immune response. Aquaculture.
Qin, L., Zhao, W., Gu, J., Li, Y., Liu, Y., & Huo, Z. (2023). Annual variations in the nutritional quality of the Geoduck clam Panopea japonica. Journal of Food Composition and Analysis.
Luo, X., Che, Z., Su, C., Wang, H., Sun, Y., Li, D., Yang, F., Huo, Z., Su, Y., & Yan, X. (2023). Embryonic development, survival and growth of triploid Zebra Clam II strain of the Manila clam Ruditapes philippinarum. Aquaculture Reports.
Zhang, Z., Wang, J., Huo, Z., Nie, H., Yan, X., & Ding, J. (2023). Identification and expression of cysteine sulfite decarboxylase genes and their response to hyposalinity stress in Ruditapes philippinarum. Frontiers in Marine Science.
Yin, Z., Wang, Z., Zhang, Y., Yin, X., Yan, X., Wang, B., & Nie, H. (2022). Examination of the potential roles of insulin-like peptide receptor in regulating the growth of Manila clam Ruditapes philippinarum. Comparative biochemistry and physiology. Part A, Molecular & integrative physiology, 274, 111315. https://doi.org/10.1016/j.cbpa.2022.111315
Wang, F., Li, C., Zhao, W. et al. Toxicity of ammonia to larvae and juveniles of the geoduck clam Panopea japonica. Fish Sci 88, 311–317 (2022). https://doi.org/10.1007/s12562-022-01588-z